The detailed information of tRNA gene sequence


Sequence ID>WENV170711307
Genome IDLNFM01004478
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 27565
End posion on genome 27641
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atggccaagt
tRNA gene sequence 
CGGGGTATAGCGCAGCCCGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCCCAGGTTCGAA
TCCTGGTGCCCCGACCA
Downstream region at tRNA end position 
ttccgggcgt
Secondary structure (Cloverleaf model)
>WENV170711307	Pro	TGG
                   t      ACCA ttccgggcgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     G G T C C     A
      C G A        A      | | | | |     G
    C       C G C G       C C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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