The detailed information of tRNA gene sequence


Sequence ID>WENV170711354
Genome IDLNFM01004829
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 797
End posion on genome 889
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgggtctgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCCGAAGGCGGCGGTTTGCTAAACCGTTATACGGGGATAACCC
GTATCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
tatctcattg
Secondary structure (Cloverleaf model)
>WENV170711354	Ser	GCT
                   c      GCCA tatctcattg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACGGGGATAACCCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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