The detailed information of tRNA gene sequence


Sequence ID>WENV170711480
Genome IDLNFM01005455
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 21996
End posion on genome 21907
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnntcgc
tRNA gene sequence 
GGAGAGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGCTAATCCCCA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaatgagtc
Secondary structure (Cloverleaf model)
>WENV170711480	Ser	GGA
                   c      GCCA aaaatgagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGCTAATCCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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