The detailed information of tRNA gene sequence


Sequence ID>WENV170711513
Genome IDLNFM01005596
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 21553
End posion on genome 21464
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nntgacatgc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCACCGCACTCGAAATGCGGCGTGCCGGTGACGGTA
CCTAGGGTTCGAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
tttatcattg
Secondary structure (Cloverleaf model)
>WENV170711513	Ser	CGA
                   c      GCCA tttatcattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       T A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTGCCGGTGACGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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