The detailed information of tRNA gene sequence


Sequence ID>WENV170711547
Genome IDLNFM01005799
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 3717
End posion on genome 3807
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgggttttt
tRNA gene sequence 
GGAAGTTTGGCCGAGCGGTCGATGGCACCACCTTGGAAAGGTGGCGGGCGGCGTAGCTGT
CCCAAGGGTTCGAATCCCTTAGCTTCCGCCA
Downstream region at tRNA end position 
ggaccggaga
Secondary structure (Cloverleaf model)
>WENV170711547	Ser	GGA
                   t      GCCA ggaccggaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        A     CGGGCGGCGTAGCTGTCCC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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