The detailed information of tRNA gene sequence


Sequence ID>WENV170711548
Genome IDLNFM01005799
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 3813
End posion on genome 3902
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccaggacc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTTTATGGTGAACCCTTGCTAAGGGTTTGGGGGCGAAAACCCT
CCGTGGGTTCGAATCCCACTCTCTCCTCCA
Downstream region at tRNA end position 
gcctccagcc
Secondary structure (Cloverleaf model)
>WENV170711548	Ser	GCT
                   c      TCCA gcctccagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      T T A        G     TGGGGGCGAAAACCCTCC
                    A - T
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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