The detailed information of tRNA gene sequence


Sequence ID>WENV170711549
Genome IDLNFM01005799
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 3951
End posion on genome 4042
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataaccctgc
tRNA gene sequence 
GGAAGAGTGGCAGAGTGGGCTATTGCACCCGCCTTGAAAGCGGGCGGTCGGCGCGAGTCG
GCCCGTGGGTTCGAATCCTACCTCTTCCGCCA
Downstream region at tRNA end position 
tcccgcaatg
Secondary structure (Cloverleaf model)
>WENV170711549	Ser	TGA
                   c      GCCA tcccgcaatg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    G       T T G C
      C T A        A     CGGTCGGCGCGAGTCGGCCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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