The detailed information of tRNA gene sequence


Sequence ID>WENV170711717
Genome IDLNFM01006724
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1165
End posion on genome 1091
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgggctaT
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCGGGCCGCTCATAACGGCTTGGTTGGGGGTTCGAGT
CCCTCCGGGCCCATtc
Downstream region at tRNA end position 
cgcccgcccg
Secondary structure (Cloverleaf model)
>WENV170711717	Met	CAT
                   T      ATtc cgcccgcccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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