The detailed information of tRNA gene sequence


Sequence ID>WENV170711749
Genome IDLNFM01007051
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 7005
End posion on genome 7101
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgtctgcgac
tRNA gene sequence 
GGAGTCACTTCCCGAGCTGGTGACGGGCCCGGTCTTCAAAACCGGTGGACACGCGGCTTT
CGTCGCGGTCGGCAGGTTCGATTCCTGTGTGGCTCCGtgg
Downstream region at tRNA end position 
ttttttcgtg
Secondary structure (Cloverleaf model)
>WENV170711749	SeC(p)	TCA
                   c      Gtgg ttttttcgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     C - G
                     A - T
                     C - G          T T
                    T     T G T C C     A
      C G A        T      + | | | |     G
    T       G C C C       G C A G G     C
    G       | | | |                 T T
    G       C G G G
      T G A        C     TGGACACGCGGCTTTCGTCGCGGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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