The detailed information of tRNA gene sequence


Sequence ID>WENV170711765
Genome IDLNFM01007187
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 17550
End posion on genome 17626
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgccctcttt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCACCTGCCTTGGGCGCAGGGGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
gtcaacggtc
Secondary structure (Cloverleaf model)
>WENV170711765	Pro	TGG
                   t      ACCA gtcaacggtc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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