The detailed information of tRNA gene sequence


Sequence ID>WENV170711837
Genome IDLNFM01007745
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 3952
End posion on genome 4041
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgccttccgt
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGGAACCGTA
TCGCGGGTTCGAATCCCGCCCTGTCCGCCA
Downstream region at tRNA end position 
gccctttcgc
Secondary structure (Cloverleaf model)
>WENV170711837	Ser	GGA
                   t      GCCA gccctttcgc
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGGAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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