The detailed information of tRNA gene sequence


Sequence ID>WENV170711906
Genome IDLNFM01008236
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1197
End posion on genome 1272
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaaggcagc
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGAAA
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tccgctcgat
Secondary structure (Cloverleaf model)
>WENV170711906	Trp	CCA
                   c      GCCA tccgctcgat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          A A
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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