The detailed information of tRNA gene sequence


Sequence ID>WENV170711943
Genome IDLNFM01008536
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 17811
End posion on genome 17716
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catgttctct
tRNA gene sequence 
GGAGGGTATGTGCATCGCGGTCTGCACACCATTCTGCTAAACTGGGACGCCGAGAAAAAA
TCGGCGCAGTCGGTTCGACTCCGGCACCCTCCGCCG
Downstream region at tRNA end position 
atcgctcgcg
Secondary structure (Cloverleaf model)
>WENV170711943	Ser	GCT
                   t      GCCG atcgctcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    A     C G G C C     A
    G C T A        T      | + | | |     G
  C         C G T G       G T C G G     C
  G         | | | |                 T T
  G         G C A C
    T C T          A     GACGCCGAGAAAAAATCGGCGCA
                    C - G
                    C - G
                    A - T
                    T   C
                    T - A
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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