The detailed information of tRNA gene sequence


Sequence ID>WENV170712068
Genome IDLNFM01009560
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 11201
End posion on genome 11276
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctcgaggcg
tRNA gene sequence 
GGGCCCGTAGCTCAATGGTTAGAGCCGGCGGCTCATAACCGCTTGGTTGGGGGTTCGAAT
CCCTCCGGGCCCACCA
Downstream region at tRNA end position 
ttctcgcccc
Secondary structure (Cloverleaf model)
>WENV170712068	Met	CAT
                   g      ACCA ttctcgcccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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