The detailed information of tRNA gene sequence


Sequence ID>WENV170712172
Genome IDLNFM01010373
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 12973
End posion on genome 13062
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaggcttcgc
tRNA gene sequence 
GGAAGGGTGGATGAGCGGTTTAAGTCACACGCCTGGAAAGCGTGCGTAGGGTTAAACCTA
CCGCGGGTTCGAATCCCGCCTCTTCCGCCA
Downstream region at tRNA end position 
gaaaacaagt
Secondary structure (Cloverleaf model)
>WENV170712172	Ser	GGA
                   c      GCCA gaaaacaagt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CGTAGGGTTAAACCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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