The detailed information of tRNA gene sequence


Sequence ID>WENV170712190
Genome IDLNFM01010647
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 12848
End posion on genome 12759
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnccgg
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTTTACGGGAAACCGTA
ACGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
acatctctgc
Secondary structure (Cloverleaf model)
>WENV170712190	Ser	GGA
                   g      GCCA acatctctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TTTACGGGAAACCGTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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