The detailed information of tRNA gene sequence


Sequence ID>WENV170712193
Genome IDLNFM01010671
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 9820
End posion on genome 9744
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacacattgc
tRNA gene sequence 
GGGGTCGTAGCTCAGTCGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
CCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
ctcccgcaag
Secondary structure (Cloverleaf model)
>WENV170712193	Asp	GTC
                   c      GCCA ctcccgcaag
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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