The detailed information of tRNA gene sequence


Sequence ID>WENV170712197
Genome IDLNFM01010712
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1485
End posion on genome 1396
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccggggttc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGTCGCACTCGAAATGCGAAGTACGGGTAACCGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
actaaccact
Secondary structure (Cloverleaf model)
>WENV170712197	Ser	CGA
                   c      GCCA actaaccact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     AGTACGGGTAACCGTACC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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