The detailed information of tRNA gene sequence


Sequence ID>WENV170712229
Genome IDLNFM01011117
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 12365
End posion on genome 12276
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnccct
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTGTACGTGAAAGCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atggtttatt
Secondary structure (Cloverleaf model)
>WENV170712229	Ser	GGA
                   t      GCCA atggtttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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