The detailed information of tRNA gene sequence


Sequence ID>WENV170712234
Genome IDLNFM01011164
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 12383
End posion on genome 12309
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccggatccc
tRNA gene sequence 
GGACGCATAGCTCAGCGGGAGAGCGTTCCCTTCACACGGGAGAGGTCCAAGGTTCGATCC
CTTGTGCGTCCACCA
Downstream region at tRNA end position 
ttttgtaagg
Secondary structure (Cloverleaf model)
>WENV170712234	Val	CAC
                   c      ACCA ttttgtaagg
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T          C T
                    T     G T T C C     A
        G A        A      | | | | |     G
      C     C T C G       C A A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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