The detailed information of tRNA gene sequence


Sequence ID>WENV170712259
Genome IDLNFM01011494
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 15547
End posion on genome 15472
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgaatgcat
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGAGA
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cccgcacgaa
Secondary structure (Cloverleaf model)
>WENV170712259	Trp	CCA
                   t      GCCA cccgcacgaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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