The detailed information of tRNA gene sequence


Sequence ID>WENV170712265
Genome IDLNFM01011604
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 11745
End posion on genome 11669
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataatttag
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCACTGGTTCGAG
TCCAGTCAGACCCACCA
Downstream region at tRNA end position 
acaaatcaag
Secondary structure (Cloverleaf model)
>WENV170712265	Met	CAT
                   g      ACCA acaaatcaag
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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