The detailed information of tRNA gene sequence


Sequence ID>WENV170712276
Genome IDLNFM01011722
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 11810
End posion on genome 11721
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcttgcac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTGTAGGGGAAACTCTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
cggcacgaca
Secondary structure (Cloverleaf model)
>WENV170712276	Ser	GGA
                   c      GCCA cggcacgaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTAGGGGAAACTCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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