The detailed information of tRNA gene sequence


Sequence ID>WENV170712299
Genome IDLNFM01011954
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 11592
End posion on genome 11503
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnac
tRNA gene sequence 
GGAGAGTTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAGGGCCTCGCGGTCC
TCGTGAGTTCGAATCTCACACTCTCCGCCA
Downstream region at tRNA end position 
gagtcttgat
Secondary structure (Cloverleaf model)
>WENV170712299	Ser	TGA
                   c      GCCA gagtcttgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAGGGCCTCGCGGTCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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