The detailed information of tRNA gene sequence


Sequence ID>WENV170712348
Genome IDLNFM01012250
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 4880
End posion on genome 4956
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctgcctgcca
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
gatgtaaacc
Secondary structure (Cloverleaf model)
>WENV170712348	Asp	GTC
                   a      GCCA gatgtaaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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