The detailed information of tRNA gene sequence


Sequence ID>WENV170712410
Genome IDLNFM01013071
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 5344
End posion on genome 5255
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatcgtgagc
tRNA gene sequence 
GGTGAGGTGCGAGAGTGGTTGAATCGAACGGTCTCGAAAATCGTCGTACCCGAAAGGGTA
CCGTGGGTTCGAATCCCACCCTCACCGCCA
Downstream region at tRNA end position 
gtttctttaa
Secondary structure (Cloverleaf model)
>WENV170712410	Ser	CGA
                   c      GCCA gtttctttaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        A     CGTACCCGAAAGGGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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