The detailed information of tRNA gene sequence


Sequence ID>WENV170712494
Genome IDLNFM01014042
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 119
End posion on genome 208
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accccggcgc
tRNA gene sequence 
GGAGAGGTGGCGGAGTGGTCGATCGCGCCGGTCTCGAAAACCGGTATACTCGCAAGGGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gcacgtcatc
Secondary structure (Cloverleaf model)
>WENV170712494	Ser	CGA
                   c      GCCA gcacgtcatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G A G G G     C
    G       + | | |                 T T
    T       T C G C
      C G A        G     TATACTCGCAAGGGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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