The detailed information of tRNA gene sequence


Sequence ID>WENV170712606
Genome IDLNFM01015403
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1153
End posion on genome 1077
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgtcgatgc
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ttataaggtc
Secondary structure (Cloverleaf model)
>WENV170712606	Asp	GTC
                   c      GCCA ttataaggtc
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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