The detailed information of tRNA gene sequence


Sequence ID>WENV170712740
Genome IDLNFM01017072
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 8369
End posion on genome 8282
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGGCCCGCAAGGGCCC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
atctcgagtc
Secondary structure (Cloverleaf model)
>WENV170712740	Ser	TGA
                   n      GCCA atctcgagtc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGGCCCGCAAGGGCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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