The detailed information of tRNA gene sequence


Sequence ID>WENV170712818
Genome IDLNFM01018331
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1857
End posion on genome 1781
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgagcagcgc
tRNA gene sequence 
GCGGGCGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCGCCCGCGCCA
Downstream region at tRNA end position 
ttctccctgt
Secondary structure (Cloverleaf model)
>WENV170712818	Asp	GTC
                   c      GCCA ttctccctgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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