The detailed information of tRNA gene sequence


Sequence ID>WENV170712939
Genome IDLNFM01020892
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 4112
End posion on genome 4023
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnntcgc
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGCTAATACCCA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaattgagtt
Secondary structure (Cloverleaf model)
>WENV170712939	Ser	GGA
                   c      GCCA aaattgagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGCTAATACCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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