The detailed information of tRNA gene sequence


Sequence ID>WENV170713030
Genome IDLNFM01022586
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 6262
End posion on genome 6187
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagctcccgc
tRNA gene sequence 
AGGGGTATAGCTCAACTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
cccaacgtcg
Secondary structure (Cloverleaf model)
>WENV170713030	Trp	CCA
                   c      GCCA cccaacgtcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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