The detailed information of tRNA gene sequence


Sequence ID>WENV170713110
Genome IDLNFM01024061
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 134
End posion on genome 44
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcgattccc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCACGCCTGGAAAGTGTGTATAGGTTAATAGCCT
ATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaccataaaa
Secondary structure (Cloverleaf model)
>WENV170713110	Ser	GGA
                   c      GCCA gaccataaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TATAGGTTAATAGCCTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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