The detailed information of tRNA gene sequence


Sequence ID>WENV170713122
Genome IDLNFM01024256
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1918
End posion on genome 1829
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acactcgcta
tRNA gene sequence 
GGAGACGTCGCATAGTTCGGCCTAGTGCACCACCCTGCTAAGGTGGAGTCCCCGCAAGGG
GACCGCGGGTTCAAATCCCGCCGTCTCCGCgg
Downstream region at tRNA end position 
aacgagccgc
Secondary structure (Cloverleaf model)
>WENV170713122	Ser	GCT
                   a      GCgg aacgagccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     A
  C         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        A     AGTCCCCGCAAGGGGACC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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