The detailed information of tRNA gene sequence


Sequence ID>WENV170713231
Genome IDLNFM01026744
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 688
End posion on genome 614
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taacgattct
tRNA gene sequence 
AGGGGAGTAGCTCAATGGTAGAGCATCCGTCTCCAAAGCGGAGGGCTGCAGGTTCAAGTC
CTGTCTCCCCTGCCA
Downstream region at tRNA end position 
cccgcacctg
Secondary structure (Cloverleaf model)
>WENV170713231	Trp	CCA
                   t      GCCA cccgcacctg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
        A A        A      + | | | |     A
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGCT
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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