The detailed information of tRNA gene sequence


Sequence ID>WENV170713258
Genome IDLNFM01027372
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 8907
End posion on genome 8818
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGTCGCACTCGAAATGCGAAGTACGGGCAACCGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttatcgct
Secondary structure (Cloverleaf model)
>WENV170713258	Ser	CGA
                   n      GCCA ttttatcgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     AGTACGGGCAACCGTACC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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