The detailed information of tRNA gene sequence


Sequence ID>WENV170713312
Genome IDLNFM01028536
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 400
End posion on genome 324
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaatacgtat
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCAAG
TCCGGTCAGGGTCGCCA
Downstream region at tRNA end position 
cggcgacggg
Secondary structure (Cloverleaf model)
>WENV170713312	Asp	GTC
                   t      GCCA cggcgacggg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G G C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C C G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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