The detailed information of tRNA gene sequence


Sequence ID>WENV170713313
Genome IDLNFM01028566
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 5077
End posion on genome 5001
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnctcgc
tRNA gene sequence 
GGAGACGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGTCGGAGGTCGCGGGTTCGAG
CCCCGTCGTCTCCGCCA
Downstream region at tRNA end position 
tttaattcta
Secondary structure (Cloverleaf model)
>WENV170713313	Asp	GTC
                   c      GCCA tttaattcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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