The detailed information of tRNA gene sequence


Sequence ID>WENV170713356
Genome IDLNFM01029262
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 4789
End posion on genome 4698
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttaaaggtc
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGAACGGTTTGCTAAATCGTCGTACGGGTTACACTG
TACCGTGGGTTCGAATCCCACCCTCTCCGCAA
Downstream region at tRNA end position 
aacccgcatt
Secondary structure (Cloverleaf model)
>WENV170713356	Ser	GCT
                   c      GCAA aacccgcatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACGGGTTACACTGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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