The detailed information of tRNA gene sequence


Sequence ID>WENV170713450
Genome IDLNFM01031817
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1783
End posion on genome 1693
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnttaaaT
tRNA gene sequence 
GGAGACGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGGAAACTGTA
TCAAGGGTTCGAATCCCTTCGTCTCCGCCC
Downstream region at tRNA end position 
taacccgtca
Secondary structure (Cloverleaf model)
>WENV170713450	Ser	GGA
                   T      GCCC taacccgtca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGGAAACTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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