The detailed information of tRNA gene sequence


Sequence ID>WENV170713524
Genome IDLNFM01033847
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 5357
End posion on genome 5270
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttttgcacc
tRNA gene sequence 
GGAGAGTTGGCAGAGCGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
TGGGGTTCGAATCCCTAACTCTCCGCAA
Downstream region at tRNA end position 
aaagcagctt
Secondary structure (Cloverleaf model)
>WENV170713524	Ser	TGA
                   c      GCAA aaagcagctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     A T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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