The detailed information of tRNA gene sequence


Sequence ID>WENV170713530
Genome IDLNFM01033928
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 4159
End posion on genome 4248
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaacaggct
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTACAGGAAACTGTA
CCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tccgaatctt
Secondary structure (Cloverleaf model)
>WENV170713530	Ser	GGA
                   t      GCCA tccgaatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACAGGAAACTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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