The detailed information of tRNA gene sequence


Sequence ID>WENV170713715
Genome IDLNFM01039838
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2701
End posion on genome 2607
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttcgaccctt
tRNA gene sequence 
GGGGGCGTTTGCACAACTGGTGTTGGCCCGGGTCTTCAAAACCCGTGGCGGGTGTGAACA
GCGCTCGCTGTCGGTTCGATTCCGATACGCCCCCGttc
Downstream region at tRNA end position 
gcaccgctag
Secondary structure (Cloverleaf model)
>WENV170713715	SeC(p)	TCA
                   t      Gttc gcaccgctag
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    T     T A G C C     A
      C A A        T      + | | | |     G
    T       C A C G       G T C G G     C
    G           | |                 T T
    G       T G G C
      T G T        C     TGGCGGGTGTGAACAGCGCTCGCT
                    C - G
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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