The detailed information of tRNA gene sequence


Sequence ID>WENV170713855
Genome IDLNFM01044620
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1193
End posion on genome 1280
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcggcgcatc
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCAACGGGCAACCGTTC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
gacccgcgct
Secondary structure (Cloverleaf model)
>WENV170713855	Ser	TGA
                   c      GCCA gacccgcgct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAACGGGCAACCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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