The detailed information of tRNA gene sequence


Sequence ID>WENV170714071
Genome IDLNFM01052731
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2731
End posion on genome 2642
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnngcg
tRNA gene sequence 
GGACGGGTGGCCGAGTGGTCGATGGCGCACGCCTGGAAAGTGTGTAGACGTGAAAGCGTC
TCGTGGGTTCGAATCCCACCCCGTCCGCCA
Downstream region at tRNA end position 
gaatattgtc
Secondary structure (Cloverleaf model)
>WENV170714071	Ser	GGA
                   g      GCCA gaatattgtc
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TAGACGTGAAAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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