The detailed information of tRNA gene sequence


Sequence ID>WENV170714163
Genome IDLNFM01058505
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2452
End posion on genome 2363
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTTAAGGCGCACGCTTGGAAAGCGTGTGTGCGTGAAAGCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atctattccc
Secondary structure (Cloverleaf model)
>WENV170714163	Ser	GGA
                   t      GCCA atctattccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTGCGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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