The detailed information of tRNA gene sequence


Sequence ID>WENV170714254
Genome IDLNFM01063912
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2143
End posion on genome 2241
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggtcgccggt
tRNA gene sequence 
GGAAGCGCGTGCCGAACTGGTGTCGGCCTCGGTCTTCAAAACCGATGATGCTCTGCGCGA
GCAGCGGCATGGTGGGTTCGATTCCCATGCGCTTCCGCCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170714254	SeC(p)	TCA
                   t      GCCn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A A        T      + | | | |     G
    T       G C C G       G T G G G     C
    G       | | | |                 T T
    G       C G G C
      T G T        C     TGATGCTCTGCGCGAGCAGCGGCATG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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