The detailed information of tRNA gene sequence


Sequence ID>WENV170714427
Genome IDLNFM01073002
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1101
End posion on genome 1177
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgggaccat
tRNA gene sequence 
GGGGGAGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAG
TCCCGTCTCTCTCGCCA
Downstream region at tRNA end position 
cccggttttc
Secondary structure (Cloverleaf model)
>WENV170714427	Asp	GTC
                   t      GCCA cccggttttc
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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