The detailed information of tRNA gene sequence


Sequence ID>WENV170714929
Genome IDLNFM01116119
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 1136
End posion on genome 1221
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atggggaaac
tRNA gene sequence 
AGAGGAGTGGTAGAGCGGTTTATTGCACCGGTCTTGAAAACCGGAGACTGTAACAGGTCC
GTGGGTTCGAATCCCTCCTCCTCTGCtg
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170714929	Ser	TGA
                   c      GCtg nnnnnnnnnn
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      |   | | |     G
    G       G A T G       G T G G G     C
    G       + | + |                 T T
    T       T T G C
      T T A        A     AGACTGTAACAGGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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