The detailed information of tRNA gene sequence


Sequence ID>WENV170714990
Genome IDLNFM01122858
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 989
End posion on genome 893
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atgattgcag
tRNA gene sequence 
GGGGGTGGATGGGGTCTGGTGGTCCCCGCGGTCTTCAAAACCGTTGCGGCCCGACCACGT
CGGGCTGGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
tcgcgcgctc
Secondary structure (Cloverleaf model)
>WENV170714990	SeC(p)	TCA
                   g      GCCA tcgcgcgctc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       G G G G       G T G G G     C
    G       + | | |                 T T
    T       T C C C
      G G          C     TGCGGCCCGACCACGTCGGGCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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